EcoKMER: One-stop shop for spatio-temporal metagenomic exploration using DataFed
USDOE, USDOE, Conner Phillips, Joshua Brown, Juliette Duncan, Blake Nedved, Owen P. Leiser, Noelani R Boise, Ruonan Wu, Lindsey Anderson, Olga Kuchar, Margaret Cheung, David D. Pollock, Patrick Widener, Connah Johnson
An R-Shiny app built on DataFed lets researchers filter metagenomic sample metadata by location, date and environmental variables, then download only matching sequence files via Globus.
bioRxiv · May 31, 2026Bioinformatics✦ In-depth digest