Author

K. Roeder

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biophysics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

A. G. Elkins· 1 shared A. M. Barker· 1 shared A. Whitehouse· 1 shared B. Wamsley· 1 shared D. M. Geschwind· 1 shared M. Peng· 1 shared S. Pasquali· 1 shared Y. Wei· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 13 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperCell Biology

A. G. Elkins

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Investigating the structural changes due to adenosine methylation of the Kaposi's sarcoma-associated herpes virus ORF50 transcript

K. Roeder, A. M. Barker, A. Whitehouse, S. Pasquali

The paper examines how adenosine methylation affects the structural stability of the KSHV ORF50 RNA stem loop by comparing energy landscapes of methylated and unmethylated forms.

bioRxiv · Nov 16, 2021Biophysics

Cell Type Hierarchy Reconstruction via Reconciliation of Multi-resolution Cluster Tree

M. Peng, B. Wamsley, A. G. Elkins, D. M. Geschwind, Y. Wei, K. Roeder

The paper introduces MRtree, a method to reconstruct cell type hierarchies from scRNA-seq data by reconciling multi-resolution cluster trees, improving upon traditional hierarchical clustering approaches.

bioRxiv · Feb 6, 2021Cell Biology