Author

K. Seki

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Plant Biology· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 3 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Assay:imaging· 1 Organism:plant (other)· 1 Research Focus:protein design· 1 Assay:protein sequence· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

A. Guo· 1 shared D. Akpinaroglu· 1 shared E. Zhu· 1 shared H. Kim· 1 shared J. Mostafa· 1 shared M. J. Kelly· 1 shared M. S. Ortiz· 1 shared M. Wang· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperBioengineering

A. Guo

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3 papers

Recent·Most cited

Structure-conditioned masked language models for protein sequence design generalize beyond the native sequence space

D. Akpinaroglu, K. Seki, A. Guo, E. Zhu, M. J. Kelly, T. Kortemme

This paper introduces Frame2seq, a structure-conditioned masked language model for protein sequence design that generates novel, stable proteins with low sequence identity to native sequences.

bioRxiv · Dec 15, 2023 · PreprintBioengineering

QTL mapping for seed morphology using the instance segmentation neural network in Lactuca spp.

K. Seki, Y. Toda

This study uses an instance segmentation neural network to quantify seed morphology in lettuce and identifies QTLs associated with seed shape traits linked to domestication.

bioRxiv · May 19, 2022Plant Biology

PATTIE: Publication access through tiered interaction & exploration

M. S. Ortiz, M. Wang, K. Seki, H. Kim, J. Mostafa

PATTIE enables exploratory spatial-semantic information retrieval in biomedical literature through an interactive system and software tools.

bioRxiv · Oct 16, 2019 · PreprintScientific Communication & Education