pLM-BLAST - distant homology detection based on direct comparison of sequence representations from protein language models
Kamil Kaminski, Jan Ludwiczak, Kamil Pawlicki, Vikram Alva, Stanisław Dunin-Horkawicz
pLM-BLAST detects distant homology by comparing sequence embeddings from ProtT5, achieving accuracy comparable to HHsearch while being faster and capable of local alignments.
Bioinformatics · Sep 15, 2023Peer-reviewedBioinformatics