BioinformaticsbioRxivPreprint
HCVTyper: A Nextflow pipeline for hepatitis C virus genome assembly, genotyping and antiviral resistance detection
Jon Bråte, Kamilla Heddeland Instefjord, Kristian Alfsnes, Kathrine Stene‐Johansen
HCVTyper is a Nextflow pipeline for HCV genome analysis that enables assembly, genotyping, and resistance detection with reproducible workflows and containerization.
DOI 10.1101/2025.10.21.683612