Author

Kasi B Vegesana

University of Virginia Health System

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Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Amy J. MathersiD· 1 shared Ann Sarah WalkeriD· 1 shared Anna E. SheppardiD· 1 shared Derrick W. CrookiD· 1 shared Ian German MesneriD· 1 shared Nicole E StoesseriD· 1 shared

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2018-2018 · peak 1/yr

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1 shared paperBioinformatics

Amy J. MathersORCID

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1 paper

Recent·Most cited

BioinformaticsMicrobial GenomicsPeer-reviewedNov 22, 2018

TETyper: a bioinformatic pipeline for classifying variation and genetic contexts of transposable elements from short-read whole-genome sequencing data

Anna E. Sheppard, Nicole E Stoesser, Ian German Mesner…·Amy J. Mathers

TETyper classifies transposable element variation and genetic contexts from whole-genome sequencing data, revealing high transposition diversity in KPC-associated Tn4401.

46 citations

whole-genome sequencingstatistical model

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