Author

Kazuteru Aoki

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1 Approach:statistical model· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Michiaki HamadaiD· 2 shared Tatsuo AdachiiD· 2 shared Yoshikazu NakamuraiD· 2 shared Aya Yokota· 1 shared Hidehito Yoshihara· 1 shared Natsuki IwanoiD· 1 shared Ryoga IshidaiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 18 mutual co-author links

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2 shared papersBioinformatics

Michiaki HamadaORCID

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2 papers

Recent·Most cited

RaptGen: A variational autoencoder with profile hidden Markov model for generative aptamer discovery

Natsuki Iwano, Tatsuo Adachi, Kazuteru Aoki, Yoshikazu Nakamura, Michiaki Hamada

RaptGen generates aptamers using a variational autoencoder with a profile hidden Markov model decoder, showing effectiveness in creating novel sequences not present in training data.

bioRxiv · Feb 17, 2021 · PreprintBioinformatics

RaptRanker: in silico RNA aptamer selection from HT-SELEX experiment based on local sequence and structure information

Ryoga Ishida, Tatsuo Adachi, Aya Yokota, Hidehito Yoshihara, Kazuteru Aoki, Yoshikazu Nakamura, Michiaki Hamada

RaptRanker ranks RNA aptamers from HT-SELEX data using sequence and structure features, outperforming existing methods in identifying high-affinity candidates.

Nucleic Acids Research · May 27, 2020Peer-reviewedBioinformatics