EpiPAMPAS: Rapid detection of intra-protein epistasis via parsimonious ancestral state reconstruction and counting mutations
Fawaz Dabbaghie, Kristina Thedinga, Georgii A. Bazykin, Tobias Marschall, Olga V. Kalinina
EpiPAMPAS detects intra-protein epistasis by analyzing multiple sequence alignments and finds interactions with low p-values in simulated and real viral protein data.
bioRxiv · Dec 13, 2024 · PreprintBioinformatics