Author

Makiko Shimoji

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:fine-mapping· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1

Frequent Co-Authors

Akino ShiromaiD· 3 shared Chiaki MutoiD· 3 shared Hiroaki SakaiiD· 3 shared Kazuhito SatouiD· 3 shared Ken NaitoiD· 3 shared Kuniko Teruya· 3 shared Takashi HiranoiD· 3 shared Yu TakahashiiD· 3 shared

Activity by Year

2015-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Akino ShiromaORCID

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Author profile →

3 papers

Recent·Most cited

Genome sequence of 12 Vigna species as a knowledge base of stress tolerance and resistance

Ken Naito, Takanori Wakatake, Tomoko Shibata, Kohtaro Iseki, Shuji Shigenobu, Yu Takahashi, Eri Ogiso‐Tanaka, Chiaki Muto, Kuniko Teruya, Akino Shiroma, Makiko Shimoji, Kazuhito Satou, Takashi Hirano, Atsushi J. Nagano, ‍Norihiko Tomooka, , Hiroaki Sakai

This study presents long-read genome assemblies of 12 Vigna species, revealing new WOX transcription factors and transcriptional changes linked to stress tolerance.

bioRxiv · Mar 28, 2022 · PreprintGenomics

Genetic factor for twisting legume pods identified by fine-mapping of shattering-related traits in azuki bean and yard-long bean

Yu Takahashi, Alisa Kongjaimun, Chiaki Muto, Yuki Ohdaira Kobayashi, Masahiko Kumagai, Hiroaki Sakai, Kazuhito Satou, Kuniko Teruya, Akino Shiroma, Makiko Shimoji, Takashi Hirano, Takehisa Isemura, Hiroki Saito, Akiko Baba-Kasai, Akito Kaga, , Ken Naito

The paper identifies MYB26 as a genetic factor for twisting legume pods through fine-mapping of shattering-related traits in azuki and yard-long beans.

bioRxiv · Sep 28, 2019 · PreprintGenetics

The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome

Hiroaki Sakai, Ken Naito, Eri Ogiso-Tanaka, Yu Takahashi, Kohtaro Iseki, Chiaki Muto, Kazuhito Satou, Kuniko Teruya, Akino Shiroma, Makiko Shimoji, Takashi Hirano, Takeshi Itoh, Akito Kaga, Norihiko Tomooka

This study uses SMRT sequencing to assemble the azuki bean genome, achieving better contiguity and gene annotation compared to second-generation sequencing methods.

bioRxiv · Jul 27, 2015Genomics