HOMINID: A framework for identifying associations between host genetic variation and microbiome composition
Joshua K. Lynch, Karen Tang, Sambhawa Priya, Joanna Sands, Margaret Sands, Evan Tang, Sayan Mukherjee, Dan Knights, Ran Blekhman
HOMINID identifies host SNPs correlated with microbiome taxa abundances using Lasso regression, showing improved accuracy over existing methods and identifying 13 SNPs across body sites.
GigaScience · Nov 7, 2017Peer-reviewedGenomics