Author

Mark Akeson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:long-read sequencing· 2 Organism:E. coli· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Miten JainiD· 2 shared Andrew M. Smith· 1 shared Arthur C Rand· 1 shared Audrey Musselman-Brown· 1 shared Benedict PateniD· 1 shared Daniel R. Garalde· 1 shared Hugh E Olsen· 1 shared Jordan Eizenga· 1 shared

Activity by Year

2017-2017 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 21 mutual co-author links

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2 shared papersBioengineering

Miten JainORCID

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2 papers

Recent·Most cited

Reading canonical and modified nucleotides in 16S ribosomal RNA using nanopore direct RNA sequencing

Andrew M. Smith, Miten Jain, Logan Mulroney, Daniel R. Garalde, Mark Akeson

This paper uses nanopore direct RNA sequencing to detect modified nucleotides in 16S rRNA, revealing a 7-methylguanosine modification linked to aminoglycoside resistance in E. coli.

bioRxiv · Apr 29, 2017 · PreprintBioengineering

Cytosine Variant Calling with High-throughput Nanopore Sequencing

Arthur C Rand, Miten Jain, Jordan Eizenga, Audrey Musselman-Brown, Hugh E Olsen, Mark Akeson, Benedict Paten

The paper presents a probabilistic method to detect and classify cytosine modifications using Oxford Nanopore MinION sequencing with high accuracy.

Nature Methods · Feb 20, 2017Peer-reviewedGenomics