Author

Mary Nellis

Emory University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Assay:metabolomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Organism:mouse· 1

Frequent Co-Authors

Dean P. JonesiD· 2 shared Donghai LiangiD· 2 shared Jiada James ZhaniD· 2 shared A W DunlopiD· 1 shared Barbara A. CohniD· 1 shared Chin-An YangiD· 1 shared Greg Martin· 1 shared Greg S. MartiniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Dean P. JonesORCID

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Author profile →

2 papers

Recent·Most cited

MSMICA: computational metabolite identification in untargeted metabolomics by integrating MS, retention time, and biological evidence

Jiada James Zhan, Jaclyn Weinberg, William J. Crandall, Zhaohui Steve Qin, Zachery Ryan Jarrell, Joshua D. Preston, Mary Nellis, Sami Nadeem Teeny, Donghai Liang, Greg S. Martin, Nathan L. Price, Rafael de Cabo, Viraj A. Master, Barbara A. Cohn, Young-Mi Go, Dean P. Jones

MSMICA improves metabolite identification in untargeted metabolomics by integrating mass spectrometry data, retention time, and biological evidence, achieving high accuracy across mammalian datasets.

bioRxiv · Aug 20, 2026 · PreprintBioinformatics

Development of a metabolomics-based index to monitor dietary effects on chronic inflammation: The Dietary Metabolomics Inflammation Index

Jiada James Zhan, Chin-An Yang, Mary Nellis, Youran Tan, Matthew Ryan Smith, Jessica Alvarez, Donghai Liang, A W Dunlop, Greg Martin, Young‐Mi Go, Dean P. Jones

The paper develops and tests the Dietary Metabolite Inflammatory Index (DMII) to assess diet-related chronic inflammation using metabolomics data, showing correlations with inflammation biomarkers.

bioRxiv · Jul 6, 2026 · PreprintBiochemistry