Author

Matt Kaeberlin

University of Washington

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Anna E. SpiroiD· 1 shared Ben W. Blue· 1 shared Joseph D. JanizekiD· 1 shared Joshua C. Russell· 1 shared Safiye ÇelikiD· 1 shared Su‐In LeeiD· 1 shared Ting-I LeeiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Anna E. SpiroORCID

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1 paper

Recent·Most cited

Principled Feature Attribution for Unsupervised Gene Expression Analysis

Joseph D. Janizek, Anna E. Spiro, Safiye Çelik, Ben W. Blue, Joshua C. Russell, Ting-I Lee, Matt Kaeberlin, Su‐In Lee

This paper introduces a novel unsupervised pathway attribution method that identifies major transcriptomic variation sources when combined with biologically-constrained models, applied to Alzheimer's disease brain samples.

bioRxiv · May 3, 2022 · PreprintBioinformatics