Author

Matthew W Hahn

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Assay:bulk RNA-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Assay:DNA methylation· 1 Research Focus:genome assembly· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Amanda L Posto· 1 shared Fabio K Mendes· 1 shared Leonie C Moyle· 1 shared Luting Zhuo· 1 shared Rafael F Guerrero· 1 shared Simo V Zhang· 1 shared Yoonsoo Hahn· 1 shared

Activity by Year

2015-2016 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 5 mutual co-author links

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1 shared paperEvolutionary Biology

Amanda L Posto

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3 papers

Recent·Most cited

Gene tree discordance generates patterns of diminishing convergence over time

Fabio K Mendes, Yoonsoo Hahn, Matthew W Hahn

The paper shows gene tree discordance can create patterns of diminishing molecular convergence over time, challenging the role of intramolecular epistasis as the sole explanation.

bioRxiv · Jun 14, 2016Evolutionary Biology

Genome-wide patterns of regulatory divergence revealed by introgression lines

Rafael F Guerrero, Matthew W Hahn, Leonie C Moyle, Amanda L Posto

The paper uses introgression lines to analyze regulatory divergence between Solanum species, finding similar contributions from cis- and trans-regulatory changes and no link between expression differences and sterility.

bioRxiv · Jan 19, 2016Evolutionary Biology

AGOUTI: improving genome assembly and annotation using transcriptome data

Simo V Zhang, Luting Zhuo, Matthew W Hahn

AGOUTI improves genome assembly contiguity and gene annotation accuracy using RNA-seq data by combining contigs into scaffolds and fragmented gene models into single models.

bioRxiv · Nov 26, 2015Bioinformatics