Author

Matthew W. Van de Graaf

University of Virginia

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Systems Biology· 1

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:gene regulatory network inference· 1 Assay:protein structure· 1

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Angela C. ZeigleriD· 1 shared Jeffrey J. SaucermaniD· 1 shared Philip M. TaniD· 1 shared Taylor G. EggertseniD· 1 shared

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2022-2022 · peak 1/yr

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Systems BiologybioRxivPreprintOct 25, 2022

Benchmarking of protein interaction databases for integration with manually reconstructed signaling network models

Matthew W. Van de Graaf, Taylor G. Eggertsen, Angela C. Zeigler…·Jeffrey J. Saucerman

The paper benchmarks protein interaction databases for their ability to recover manually curated edges from signaling network models of cardiac hypertrophy, mechano-signaling, and fibrosis.

DOI 10.1101/2022.10.25.513640

protein structurebenchmark study

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