Comparison of imaging-based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed, paraffin-embedded tumor samples
Nejla Ozirmak Lermi, Max Molina Ayala, Sharia D. Hernandez, Wei Lü, Khaja B. Khan, Alejandra G. Serrano, Idania Carolina Lubo Julio, Leticia Hamana, Katarzyna J. Tomczak, Sean Barnes, Jinzhuang Dou, Qingnan Liang, RTI Team, Ahmed Al-Rawi, Claudio A. Arrechedera, , Luisa M. Solis Soto
This study compares imaging-based spatial transcriptomics platforms using FFPE tumor samples, finding differences in performance and highlighting factors affecting data quality.
Nature Communications · Sep 26, 2025Peer-reviewedBioinformatics