Author

Mengyuan Ding

Northeastern University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Brian LordiD· 1 shared Chase Bourbon· 1 shared Cosimo UrgesiiD· 1 shared David R. VagoiD· 1 shared Franco FabbroiD· 1 shared Ginger D Atwood· 1 shared Gurpreet Bharj· 1 shared James Tanner McMahoniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperNeuroscience

Brian LordORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A network for self-transcendence derived from patients with brain lesions

Morgan Rose Healey, Yaser Sánchez Gama, Mengyuan Ding, James Tanner McMahon, Chase Bourbon, Rumaisa Jesani, Ginger D Atwood, Brian Lord, Jay Sanguinetti, Judson A. Brewer, David R. Vago, Shan Siddiqi, Franco Fabbro, Cosimo Urgesi, Jared Allen Nielsen, Michael A. Ferguson

This study identifies a brain network associated with self-transcendence using lesion network mapping in patients with brain lesions.

bioRxiv · Mar 27, 2026 · PreprintNeuroscience

Rapid and Interpretable AMR Diagnostics via Genomics and Cell Painting using Differential Geometry-based Directed-Simplicial Neural Networks on Multimodal Data

Lokendra S. Thakur, Sonia Shinde Mahajan, Gurpreet Bharj, Mengyuan Ding, Nino Dekanoidze, Vidhiti Shrivastava

This paper develops a multimodal AI model for rapid AMR prediction using genomic and cellular data, identifying key genomic motifs and phenotypic features associated with antimicrobial resistance.

bioRxiv · Mar 12, 2026 · PreprintMicrobiology