Author

Michael F. Sharpnack

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Ben S. DugganiD· 1 shared Jie ZhangiD· 1 shared Kun HuangiD· 1 shared Tongxin WangiD· 1 shared Travis S. JohnsoniD· 1 shared Xiufen YeiD· 1 shared Yusong LiuiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Ben S. DugganORCID

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1 paper

Recent·Most cited

SPCS: A Spatial and Pattern Combined Smoothing Method of Spatial Transcriptomic Expression

Yusong Liu, Tongxin Wang, Ben S. Duggan, Michael F. Sharpnack, Kun Huang, Jie Zhang, Xiufen Ye, Travis S. Johnson

This paper introduces SPCS, a two-factor smoothing method for spatial transcriptomics data that improves separability and biological interpretability compared to one-factor methods.

Briefings in Bioinformatics · Mar 10, 2022Peer-reviewedBioinformatics