LoL-align: sensitive and fast probabilistic protein structure alignment
Lasse Reifenrath, Michel van Kempen, Gyuri Kim, Soo Hyun Kim, Mohammadreza Radnezhad, Milot Mirdita, Martin Steinegger, Johannes Söding
LoL-align improves protein structure alignment by maximizing a local log-odds score, outperforming TMalign and DALI in sensitivity and speed.
bioRxiv · Nov 24, 2025 · PreprintBioinformatics