Author

Nakae Fuka

Doshisha University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:multiple species· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Chikara MizukoshiiD· 1 shared Hayashi Shuto· 1 shared Shintaro YukiiD· 1 shared Teppei ShimamuraiD· 1 shared Yadohisa Hiroshi· 1 shared Zhenan Liu· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Chikara MizukoshiORCID

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1 paper

Recent·Most cited

MUSE enables cross-species multi-omics integration that incorporates transcriptional regulatory modules

Nakae Fuka, Shintaro Yuki, Zhenan Liu, Chikara Mizukoshi, Hayashi Shuto, Teppei Shimamura, Yadohisa Hiroshi

MUSE integrates multi-omics data across species to align cellular states while preserving species-specific features and regulatory module conservation.

bioRxiv · May 7, 2026 · PreprintBioinformatics