Author

Naresh Pratap Singh

Harvard University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Microbiology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Organism:human· 2 Organism:mouse· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Flaminia CatterucciaiD· 3 shared Duo PengiD· 2 shared Elisabeth Nelson· 2 shared Laura E. de VriesiD· 2 shared Tasneem A. Rinvee· 2 shared W. Robert ShawiD· 2 shared Ailsa R. CraveniD· 1 shared Alexandra S. ProbstiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Flaminia CatterucciaORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

OocystMeter, a machine-learning algorithm to count and measure Plasmodium oocysts, reveals clustering patterns in the Anopheles midgut

Duo Peng, Eryney Marrogi, Elisabeth Nelson, Qiushi Liu, Tasneem A. Rinvee, Laura E. de Vries, Kate Thornburg, Naresh Pratap Singh, W. Robert Shaw, Flaminia Catteruccia

OocystMeter automates oocyst counting and sizing in mosquito midguts, revealing clustered spatial patterns in malaria infections.

Scientific Reports · Oct 29, 2026Peer-reviewedBioinformatics

Mapping Plasmodium transitions and interactions in the Anopheles female

Yan Yan, Lisa H. Verzier, Elaine Cheung, Federico Appetecchia, Sandra March, Ailsa R. Craven, Esrah W. Du, Alexandra S. Probst, Tasneem A. Rinvee, Laura E. de Vries, Jamie Kauffman, Sangeeta N. Bhatia, Elisabeth Nelson, Naresh Pratap Singh, Duo Peng, , Flaminia Catteruccia

This study uses single-cell RNA sequencing to map Plasmodium transitions and interactions in Anopheles mosquitoes, identifying key molecular processes and potential targets for transmission-blocking strategies.

Nature · Oct 22, 2025Peer-reviewedMicrobiology

Selection for insecticide resistance can promote Plasmodium falciparum infection in Anopheles

Kelsey L. Adams, Emily K. Selland, Bailey C. Willett, John W. Carew, Charles Vidoudez, Naresh Pratap Singh, Flaminia Catteruccia

The paper shows that pyrethroid-resistant Anopheles gambiae mosquitoes support higher Plasmodium falciparum infection intensities and growth rates compared to susceptible mosquitoes.

bioRxiv · Dec 7, 2022 · PreprintMolecular Biology