Author

Nishadi De Silva

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 2 Approach:experimental assay· 2 Research Focus:genome assembly· 2 Organism:human· 1 Assay:long-read sequencing· 1 Organism:plant (other)· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Julian ParkhilliD· 2 shared Martin HuntiD· 2 shared Andrew J. PageiD· 1 shared Jacqueline A Keane· 1 shared Jacqueline A. KeaneiD· 1 shared Michael A. Quail· 1 shared Simon R Harris· 1 shared Simon R. HarrisiD· 1 shared

Activity by Year

2015-2016 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Julian ParkhillORCID

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Author profile →

2 papers

Recent·Most cited

Robust high throughput prokaryote de novo assembly and improvement pipeline for Illumina data

Andrew J. Page, Nishadi De Silva, Martin Hunt, Michael A. Quail, Julian Parkhill, Simon R. Harris, Thomas D. Otto, Jacqueline A. Keane

This paper introduces a high-throughput pipeline for bacterial genome assembly and improvement, demonstrating robust performance across diverse datasets and achieving high gene completeness.

Microbial Genomics · Aug 25, 2016Peer-reviewedBioinformatics

Circlator: automated circularization of genome assemblies using long sequencing reads

Martin Hunt, Nishadi De Silva, Thomas D Otto, Julian Parkhill, Jacqueline A Keane, Simon R Harris

Circlator automates genome circularization using long reads, accurately circularizing 26 of 27 test sequences from bacteria and other organisms.

Genome Biology · Dec 29, 2015Peer-reviewedBioinformatics