Exploring the impact of read clustering thresholds on RADseq-based systematics: an empirical example from European amphibians.
L. Rancilhac, F. Sylvestre, C. R. Hutter, J. W. Arntzen, W. Babik, P.-A. Crochet, G. Deso, R. Duguet, P. Galan, M. Pabijan, M. Policain, P. Priol, J. Sabino-Pinto, M. Capstick, K. R. Elmer, , M. Vences
This study evaluates the impact of clustering thresholds on RADseq assemblies in amphibians, showing that topology is resilient to threshold changes but branch lengths are affected.
bioRxiv · Apr 19, 2023 · PreprintEvolutionary Biology