An open protocol for modeling T Cell Clonotype repertoires using TCRβ CDR3 sequences
Burcu Gurun, Wesley R. Horton, Dhaarini Murugan, Biqing Zhu, Patrick Leyshock, Sushil Kumar, Katelyn T. Byrne, Robert H. Vonderheide, Adam A. Margolin, Motomi Mori, Paul T. Spellman, Lisa M. Coussens, Terence Paul Speed
The paper presents a cost-effective, non-commercial protocol for normalizing TCRβ CDR3 sequencing data to correct amplification bias in bulk TCR repertoire profiling.
BMC Genomics · Jun 26, 2023Peer-reviewedBioinformatics