Confounder-aware foundation modeling for accurate phenotype profiling in cell imaging
Giorgos Papanastasiou, Pedro P. Sanchez, Argyrios Christodoulidis, Guang Yang, Walter Hugo Lopez Pinaya
This paper introduces a confounder-aware foundation model for cell imaging that improves phenotype profiling and compound target prediction, achieving state-of-the-art results for both seen and unseen compounds.
npj Imaging · Oct 22, 2025Peer-reviewedBioengineering