Author

Peter Blomberg

VTT Technical Research Centre of Finland

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:fungi (other)· 1 Research Focus:genome assembly· 1 Assay:metabolomics· 1 Approach:optimal transport· 1 Approach:statistical model· 1

Frequent Co-Authors

Sandra CastilloiD· 2 shared Juho RousuiD· 1 shared Paula JouhteniD· 1 shared Peddinti V. GopalacharyuluiD· 1 shared Sahely BhadraiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 6 mutual co-author links

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2 shared papersSystems Biology

Sandra CastilloORCID

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2 papers

Recent·Most cited

Reconstruction of compartmentalized genome-scalemetabolic models using deep learning for over 800fungi

Sandra Castillo, Peddinti V. Gopalacharyulu, Peter Blomberg, Paula Jouhten

The paper develops a deep learning method to reconstruct compartmentalized genome-scale metabolic models for over 800 fungi, improving predictions of metabolic phenotypes and phylogenetic clustering.

bioRxiv · Aug 23, 2023 · PreprintSystems Biology

Principal Metabolic Flux Mode Analysis

Sahely Bhadra, Peter Blomberg, Sandra Castillo, Juho Rousu

The paper introduces PMFA, a method combining PCA and stoichiometric flux analysis for metabolic flux mode analysis, showing its versatility through experiments.

Bioinformatics · Feb 5, 2018Peer-reviewedBioinformatics