Neighborhood nonnegative matrix factorization identifies patterns and spatially-variable genes in large-scale spatial transcriptomics data
Ragnhild Laursen, Han Chen, Jack Demaray, Karin Pelka, Barbara Elizabeth Engelhardt
The paper introduces NNMF, a spatially-aware method for analyzing spatial transcriptomics data, identifying multicellular patterns and spatially-variable genes in large datasets.
Genome biology · Jan 16, 2026Peer-reviewedGenomics