Author

Rebeca Sanz-Pamplona

Catalan Institute of Oncology (ICO), Oncobell Program, Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:machine learning (classical)· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

Alex GraudenziiD· 1 shared Almudena Mendez-Perez· 1 shared Andres M Acosta-Moreno· 1 shared Arrate Munoz-BarrutiaiD· 1 shared Bud Mishra· 1 shared Carlos Oscar Sorzano· 1 shared Carlos Wert-CarvajaliD· 1 shared DANIELE RAMAZZOTTIiD· 1 shared

Activity by Year

2016-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alex GraudenziORCID

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2 papers

Recent·Most cited

ImmunologybioRxivNov 22, 2023

Unraveling the Power of NAP-CNB's Machine Learning-enhanced Tumor Neoantigen Prediction

Almudena Mendez-Perez, Andres M Acosta-Moreno, Carlos Wert-Carvajal…·Esteban Veiga

This study validates a machine learning platform, NAP-CNB, for identifying tumor neoantigens using RNAseq data, showing improved antitumor responses with multiantigen vaccination.

DOI 10.7554/elife.95010

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsProceedings of the National Academy of SciencesPeer-reviewedJun 28, 2016

Algorithmic Methods to Infer the Evolutionary Trajectories in Cancer Progression

Giulio Caravagna, Alex Graudenzi, DANIELE RAMAZZOTTI…·Bud Mishra

The paper introduces PiCnIc, a machine learning pipeline to infer cancer progression models from NGS data, demonstrating its application to colorectal cancer and suggesting novel hypotheses.

DOI 10.1073/pnas.1520213113

humanwhole-genome sequencing

𝕏 PostBluesky