Author

Ruipeng Lu

Primary ORCID profile (0009-0002-3878-2880 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Ruipeng LuiD1 paper · Western University

Biology Disciplines

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Genetics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:variant effect prediction· 2 Assay:whole-exome sequencing· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Eliseos J Mucaki· 3 shared Peter K Rogan· 3 shared Joan H.M. Knoll· 2 shared Natasha G Caminsky· 2 shared Alain Laederach· 1 shared Ami M Perri· 1 shared Ami M. Perri· 1 shared Matthew Halvorsen· 1 shared

Activity by Year

2016-2016 · peak 3/yr

Co-Author Collaboration Network

8 top collaborators · 25 mutual co-author links

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3 shared papersGenetics

Eliseos J Mucaki

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3 papers

Recent·Most cited

A unified analytic framework for prioritization of non-coding variants of uncertain significance in heritable breast and ovarian cancer

Eliseos J Mucaki, Natasha G Caminsky, Ami M Perri, Ruipeng Lu, Alain Laederach, Matthew Halvorsen, Joan H.M. Knoll, Peter K Rogan

The paper presents a unified framework to prioritize non-coding variants of uncertain significance in heritable breast and ovarian cancer using information theory and functional analysis.

BMC Medical Genomics · Apr 11, 2016Peer-reviewedGenetics

Discovery of Primary, Cofactor, and Novel Transcription Factor Binding Site Motifs by Recursive, Thresholded Entropy Minimization

Ruipeng Lu, Eliseos J Mucaki, Peter K Rogan

The paper introduces a motif discovery method using recursive, thresholded entropy minimization to identify TF binding sites, cofactors, and novel motifs from ChIP-seq data.

bioRxiv · Mar 9, 2016Bioinformatics

Prioritizing variants in complete Hereditary Breast and Ovarian Cancer (HBOC) genes in patients lacking known BRCA mutations

Natasha G Caminsky, Eliseos J Mucaki, Ami M. Perri, Ruipeng Lu, Joan H.M. Knoll, Peter K Rogan

The paper identifies and prioritizes non-coding variants in HBOC genes for patients without known BRCA mutations using information theory to assess functional impact.

bioRxiv · Feb 9, 2016Genetics