Author

S. Aganezov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:deconvolution· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:human· 1

Frequent Co-Authors

B. J. Raphael· 1 shared L. Lebeigle· 1 shared M. Alonge· 1 shared M. C. Schatz· 1 shared M. Kirsche· 1 shared S. Soyk· 1 shared X. Wang· 1 shared Z. B. Lippman· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 21 mutual co-author links

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1 shared paperCancer Biology

B. J. Raphael

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2 papers

Recent·Most cited

Automated assembly scaffolding elevates a new tomato system for high-throughput genome editing

M. Alonge, L. Lebeigle, M. Kirsche, S. Aganezov, X. Wang, Z. B. Lippman, M. C. Schatz, S. Soyk

The paper introduces RagTag, a toolset for automating genome assembly scaffolding and patching, and establishes chromosome-scale references for tomato genotypes.

bioRxiv · Nov 18, 2021Plant Biology

Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples

S. Aganezov, B. J. Raphael

This paper introduces RCK, an algorithm to reconstruct clone- and haplotype-specific cancer karyotypes from bulk tumor samples, showing improved accuracy over existing methods.

bioRxiv · Feb 25, 2019Cancer Biology