Author

S. Shoer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

E. Segal· 2 shared B. J. Smith· 1 shared C. Zhao· 1 shared J. Moltzau-Anderson· 1 shared K. Pollard· 1 shared L. Reicher· 1 shared L. Zahavi· 1 shared V. Dubinkina· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersMicrobiology

E. Segal

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2 papers

Recent·Most cited

Pangenomes of Human Gut Microbiota Uncover Links Between Genetic Diversity and Stress Response

S. Shoer, L. Reicher, Y. Pilpel, E. Segal

This study constructs pangenomes of 728 human gut prokaryotic species, revealing genetic diversity linked to stress response, antibiotic resistance, and host characteristics.

bioRxiv · Apr 17, 2024Microbiology

Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC

B. J. Smith, C. Zhao, V. Dubinkina, X. Jin, L. Zahavi, S. Shoer, J. Moltzau-Anderson, E. Segal, K. Pollard

The paper introduces StrainPGC and MIDAS v3 to accurately estimate intraspecific microbial gene content variation in metagenomic data, outperforming existing methods and revealing functional diversity in gut microbiomes.

bioRxiv · Apr 10, 2024Microbiology