Author

Samia Ben Fredj

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biochemistry· 1

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Research Focus:clustering· 1 Approach:deep learning· 1 Assay:proteomics· 1

Frequent Co-Authors

Alexander HogrebeiD· 1 shared Bernhard KüsteriD· 1 shared Daniel Paul ZolgiD· 1 shared Florian SeefriediD· 1 shared Igor Bronshtein· 1 shared Johanna TüshausiD· 1 shared Layla Eljagh· 1 shared Lizi Mamisashvili· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBiochemistry

Alexander HogrebeORCID

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1 paper

Recent·Most cited

Unifying the analysis of bottom-up proteomics data with CHIMERYS

Martin Frejno, Michelle T. Berger, Johanna Tüshaus, Alexander Hogrebe, Florian Seefried, Michael Graber, Patroklos Samaras, Samia Ben Fredj, Vishal Sukumar, Layla Eljagh, Igor Bronshtein, Lizi Mamisashvili, Markus Schneider, Siegfried Gessulat, Tobias Schmidt, , Mathias Wilhelm

CHIMERYS deconvolves chimeric spectra in proteomic data, enabling unified analysis across DDA, DIA, and PRM experiments by accurately identifying and quantifying multiple peptides per spectrum.

Nature Methods · Apr 22, 2025Peer-reviewedBiochemistry