Author

Sanaa A. Ahmed

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Bioinformatics· 1

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Organism:bacteria (other)· 1 Organism:multiple species· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

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Chien-Chi Lo· 1 shared Karen W. Davenport· 1 shared Patrick S. G. Chain· 1 shared Po-E Li· 1 shared

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2015-2015 · peak 1/yr

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1 shared paperBioinformatics

Chien-Chi Lo

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintNov 19, 2015

From raw reads to trees: Whole genome SNP phylogenetics across the tree of life

Sanaa A. Ahmed, Chien-Chi Lo, Po-E Li…·Patrick S. G. Chain

The paper introduces PhaME, a software tool for SNP identification and phylogenetic analysis from sequencing reads and genomes, demonstrating its application across bacterial, eukaryotic, and viral datasets.

DOI 10.1101/032250

bacteria (other)virus

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