Author

Sara Rodrigues Conde

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Synthetic Biology· 1

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Approach:deep learning· 1 Assay:DNA methylation· 1 Organism:E. coli· 1 Research Focus:sequence-to-function modeling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Francesca CeroniiD· 1 shared John H.C. FongiD· 1 shared Joshua R Mayne· 1 shared Thomas E. GorochowskiiD· 1 shared Tom CopemaniD· 1 shared Tom EllisiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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1 shared paperSynthetic Biology

Francesca CeroniORCID

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1 paper

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Synthetic BiologybioRxivPreprintJan 31, 2026

Quantitative profiling of millions of nucleotides reveals sequence-encoded interactions that govern plasmid propagation

Tom Copeman, John H.C. Fong, Joshua R Mayne…·Francesca Ceroni

The paper develops a sequencing-based framework and a neural network model to predict plasmid propagation from sequence, revealing sequence-encoded interactions that influence plasmid stability and host compatibility.

DOI 10.64898/2025.12.15.694402

E. coliDNA methylation

𝕏 PostBluesky