Author

Sarvenaz Choobdar

SIB Swiss Institute of Bioinformatics

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 2 Approach:benchmark study· 1 Assay:GWAS summary statistics· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Daniel MarbachiD· 2 shared Jake CrawfordiD· 2 shared Mattia TomasoniiD· 2 shared Sven BergmanniD· 2 shared Aravind SubramanianiD· 1 shared Benjamin J. HescottiD· 1 shared David LamparteriD· 1 shared Donna K. SlonimiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Daniel MarbachORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

MONET: a toolbox integrating top-performing methods for network modularisation

Mattia Tomasoni, Sergio Gómez, Jake Crawford, Weijia Zhang, Sarvenaz Choobdar, Daniel Marbach, Sven Bergmann

MONET provides a unified toolbox for disease module identification in molecular networks using top-performing methods from the DMI DREAM Challenge.

Bioinformatics · Apr 2, 2020Peer-reviewedBioinformatics

Assessment of network module identification across complex diseases

Sarvenaz Choobdar, Mehmet Eren Ahsen, Jake Crawford, Mattia Tomasoni, Tao Fang, David Lamparter, Junyuan Lin, Benjamin J. Hescott, Xiaozhe Hu, Johnathan Mercer, Ted Natoli, Rajiv Narayan, Aravind Subramanian, Jitao David Zhang, Gustavo A. Stolovitzky, , Daniel Marbach

The paper evaluates module identification methods across disease-relevant networks using GWAS data to identify top-performing algorithms and disease-associated modules.

Nature Methods · Aug 30, 2019Peer-reviewedBioinformatics