Author

Shikha Sharma

Institute of Microbial TechnologyPrimary ORCID profile (0000-0002-0364-3162 · 2 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Shikha SharmaiD2 papers · Institute for Stem Cell Biology and Regenerative Medicine

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Akintunde EmiolaiD· 1 shared Amandeep KauriD· 1 shared Bin Yang· 1 shared Brendan Woodworth· 1 shared Kanika BansaliD· 1 shared Mannuku Pheko· 1 shared Niki M. Moutsopoulos· 1 shared Ning Duan· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

Akintunde EmiolaORCID

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2 papers

Recent·Most cited

Quantitative mapping of pseudouridines in bacteria RNA

Shikha Sharma, Brendan Woodworth, Bin Yang, Ning Duan, Mannuku Pheko, Niki M. Moutsopoulos, Akintunde Emiola

This study quantitatively maps pseudouridines in bacterial RNA using bisulfite sequencing, identifying novel transcripts and stress-response genes in E. coli and demonstrating applicability in human oral microbiomes.

Nature Communications · Feb 26, 2026Peer-reviewedMicrobiology

Deep phylo-taxono genomics reveals Xylella as a variant lineage of plant associated Xanthomonas with Stenotrophomonas and Pseudoxanthomonas as misclassified relatives

Kanika Bansal, Sanjeet Kumar, Amandeep Kaur, Shikha Sharma, Prabhu B. Patil, Prashant Patil

This study reclassifies Xylella as a variant Xanthomonas lineage and identifies misclassified relatives through phylo-taxono-genomics and comparative analysis.

Genomics · Oct 4, 2021Peer-reviewedGenomics