Author

Shishir Reddy

University of California, Irvine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:imaging· 1 Assay:long-read sequencing· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Ka Yee YeungiD· 2 shared Ling‐Hong HungiD· 2 shared Cecilia C.S. YeungiD· 1 shared Evan Straw· 1 shared Jerald P. RadichiD· 1 shared Olga Sala TorraiD· 1 shared Robert SchmitziD· 1 shared Zachary T. ColburniD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 19 mutual co-author links

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2 shared papersBioinformatics

Ka Yee YeungORCID

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2 papers

Recent·Most cited

Cloud-enabled Fiji for reproducible, integrated and modular image processing

Ling‐Hong Hung, Evan Straw, Shishir Reddy, Robert Schmitz, Zachary T. Colburn, Ka Yee Yeung

The paper introduces a cloud-enabled platform for reproducible and modular image processing workflows that integrates interactive graphics with software containers.

bioRxiv · Oct 22, 2021 · PreprintBioinformatics

A graphical, interactive and GPU-enabled workflow to process long-read sequencing data

Shishir Reddy, Ling‐Hong Hung, Olga Sala Torra, Jerald P. Radich, Cecilia C.S. Yeung, Ka Yee Yeung

The paper introduces a GPU-enabled graphical workflow for processing long-read sequencing data, achieving significant speedup and cost reduction in basecalling.

BMC Genomics · Aug 23, 2021Peer-reviewedBioinformatics