More filtering on SNP calling does not remove evidence of inter-nucleus recombination in dikaryotic arbuscular mycorrhizal fungi
Eric C. Chen, Stephanie Mathieu, Anne Hoffrichter, Jeanne Ropars, Steven Dreißig, Jörg Fuchs, Andreas Brachmann, Nicolas Corradi
The paper shows that stringent SNP filtering does not eliminate inter-nuclear recombination evidence in dikaryotic fungi, and supports retaining low-read SNPs for nuclear genotyping.
Frontiers in Plant Science · Jul 7, 2020Peer-reviewedGenomics