Author

Eric C. Chen

The University of TokyoORCID 0000-0002-0568-7425Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:fungi (other)· 2 Approach:experimental assay· 1 Assay:Hi-C· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Nicolas CorradiiD· 2 shared Andreas BrachmanniD· 1 shared Anne HoffrichteriD· 1 shared Calvin CornelliD· 1 shared Gökalp YildiririD· 1 shared Jana SperschneideriD· 1 shared Jeanne RoparsiD· 1 shared Jörg FuchsiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersGenomics

Nicolas CorradiORCID

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2 papers

Recent·Most cited

GenomicsNew PhytologistPeer-reviewedNov 7, 2021

Long reads and Hi-C sequencing illuminate the two-compartment genome of the model arbuscular mycorrhizal symbiont Rhizophagus irregularis

Gökalp Yildirir, Jana Sperschneider, Mathu Malar C…·Nicolas Corradi

The paper uses long reads and Hi-C sequencing to analyze genome structure and compartmentalization in Rhizophagus irregularis, revealing two distinct chromatin compartments with different gene and repeat content.

89 citationstop 2%

fungi (other)long-read sequencing

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GenomicsFrontiers in Plant SciencePeer-reviewedJul 7, 2020

More filtering on SNP calling does not remove evidence of inter-nucleus recombination in dikaryotic arbuscular mycorrhizal fungi

Eric C. Chen, Stephanie Mathieu, Anne Hoffrichter…·Nicolas Corradi

The paper shows that stringent SNP filtering does not eliminate inter-nuclear recombination evidence in dikaryotic fungi, and supports retaining low-read SNPs for nuclear genotyping.

13 citations

fungi (other)whole-genome sequencing

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