Author

Stephen B Montgomery

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Research Focus:GWAS / association mapping· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexis Battle· 2 shared David A Knowles· 2 shared Douglas F Levinson· 2 shared James B Potash· 2 shared Jianxin ShiiD· 2 shared Joe R Davis· 2 shared Myrna M Weissman· 2 shared Sara MostafaviiD· 2 shared

Activity by Year

2015-2017 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Alexis Battle

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3 papers

Recent·Most cited

Allele-specific expression reveals interactions between genetic variation and environment

David A Knowles, Joe R Davis, Anil Raj, Xiaowei Zhu, James B Potash, Myrna M Weissman, Jianxin Shi, Douglas F Levinson, Sara Mostafavi, Stephen B Montgomery, Alexis Battle

The paper identifies gene-environment interactions by analyzing allele-specific expression in whole blood from 922 individuals using a hierarchical Bayesian model.

Nature Methods · May 22, 2017Peer-reviewedGenomics

The impact of structural variation on human gene expression

Colby Chiang, Alexandra J Scott, Joe R Davis, Emily K Tsang, Xin Li, Yungil Kim, Farhan N Damani, Liron Ganel, GTEx Consortium, Stephen B Montgomery, Alexis Battle, Donald F Conrad, Ira M Hall

This study identifies structural variants (SVs) as significant contributors to gene expression, finding they are more frequent causal variants than previously estimated and have larger effect sizes.

Nature Genetics · Apr 3, 2017Peer-reviewedGenomics

Impact of the X chromosome and sex on regulatory variation

Kimberly R Kukurba, Princy Parsana, Kevin S Smith, Zachary Zappala, David A Knowles, Marie-Julie Favé, Xin Li, Xiaowei Zhu, James B Potash, Myrna M Weissman, Jianxin Shi, Anshul Kundaje, Douglas F Levinson, Philip Awadalla, Sara Mostafavi, , Stephen B Montgomery

This study examines how the X chromosome and sex influence gene regulation and disease by analyzing gene expression and regulatory variation in whole blood from 922 individuals.

bioRxiv · Aug 7, 2015Genomics