Author

Susan P Ribeiro

Emory University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Craig M. CoopersmithiD· 1 shared Rishikesan KamaleswaraniD· 1 shared Seibi KobaraiD· 1 shared Sheikh Abdul RahmaniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Craig M. CoopersmithORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Microenvironment-informed inference of transcriptional progression geometry

Seibi Kobara, Sheikh Abdul Rahman, Susan P Ribeiro, Craig M. Coopersmith, Rishikesan Kamaleswaran

BIOCURRENT infers donor-specific pseudotime geometry in transcriptomic data by modeling gene expression with microenvironmental context and latent pseudotime, revealing condition- and donor-specific distortions in progression intervals.

bioRxiv · Aug 24, 2026 · PreprintBioinformatics