Author

Seibi Kobara

Emory UniversityORCID 0000-0001-8134-7652Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Rishikesan KamaleswaraniD· 2 shared Annette M. EsperiD· 1 shared Carmen C. Polito· 1 shared Chase M. FensoreiD· 1 shared Craig M. CoopersmithiD· 1 shared Daniel R. StrukiD· 1 shared Daniela ChanciiD· 1 shared John Dimandja· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMolecular Biology

Rishikesan KamaleswaranORCID

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2 papers

Recent·Most cited

Methodological assessment of PDMS passive sampling for skin VOC collection across body sites

Seibi Kobara, Min Huang, Rizky Ilhamsyah, Daniel R. Struk, John Dimandja, Peter J. Hesketh, Daniela Chanci, Chase M. Fensore, Carmen C. Polito, Rishikesan Kamaleswaran, Annette M. Esper

This study evaluates a simplified PDMS sampling method for skin VOC collection, finding it captures individual VOC profiles with lower within-donor variability than between-donor variability.

Metabolites · Sep 29, 2026Peer-reviewedMolecular Biology

Microenvironment-informed inference of transcriptional progression geometry

Seibi Kobara, Sheikh Abdul Rahman, Susan P Ribeiro, Craig M. Coopersmith, Rishikesan Kamaleswaran

BIOCURRENT infers donor-specific pseudotime geometry in transcriptomic data by modeling gene expression with microenvironmental context and latent pseudotime, revealing condition- and donor-specific distortions in progression intervals.

bioRxiv · Aug 24, 2026 · PreprintBioinformatics