Author

Swagatam Chakraborti

Indraprastha Institute of Information Technology Delhi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Approach:graph neural network· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Aayushi MittaliD· 1 shared Colleen C. NelsoniD· 1 shared Debajyoti Sinha· 1 shared Debarka SenguptaiD· 1 shared Gaurav AhujaiD· 1 shared Krishan GuptaiD· 1 shared N BhattacharyaiD· 1 shared Tanmoy ChakrabortyiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Aayushi MittalORCID

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1 paper

Recent·Most cited

Simultaneous visualization of cells and marker genes from scRNA-seq studies

N Bhattacharya, Swagatam Chakraborti, Krishan Gupta, Aayushi Mittal, Debajyoti Sinha, Colleen C. Nelson, Tanmoy Chakraborty, Gaurav Ahuja, Debarka Sengupta

Stardust is a visualization method that embeds cells and marker genes together on a 2D map, performing competitively with existing tools on scRNA-seq and spatial transcriptomics data.

bioRxiv · Dec 27, 2022 · PreprintBioinformatics