Author

T. Alicai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Ecology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:chromatin & epigenetic regulation· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Organism:plant (other)· 1

Frequent Co-Authors

G. Okao-Okuja· 3 shared L. M. Boykin· 3 shared A. Savill· 2 shared B. R. De Marchi· 2 shared F. Tairo· 2 shared J. Ndunguru· 2 shared M. A. Kehoe· 2 shared P. Abidrabo· 2 shared

Activity by Year

2016-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersEcology

G. Okao-Okuja

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4 papers

Recent·Most cited

Developing a predictive model for an emerging epidemic on cassava in sub-Saharan Africa

D. Godding, R. O. J. H. Stutt, T. Alicai, P. Abidrabo, G. Okao-Okuja, C. A. Gilligan

The paper develops a spatiotemporal epidemic model for cassava brown streak disease in Uganda, aiming to predict its spread across sub-Saharan Africa.

bioRxiv · May 13, 2022Ecology

Recombination detected in the Heat Shock Protein 90 (HSP90) of the Bemisia tabaci species complex

T. Kinene, B. R. De Marchi, L. S. M. Luboobi, T. Alicai, C. Omongo, A. Savill, L. M. Boykin

The paper detects recombination events in the HSP90 gene of Bemisia tabaci species complex, which may contribute to their survival and abundance in hot conditions.

bioRxiv · May 31, 2019 · PreprintEvolutionary Biology

Real time portable genome sequencing for global food security

L. M. Boykin, A. Ghalab, B. R. De Marchi, A. Savill, J. M. Wainaina, T. Kinene, S. Lamb, M. Rodrigues, M. A. Kehoe, J. Ndunguru, F. Tairo, P. Sseruwagi, C. Kayuki, D. Mark, J. Erasto, , S. Kiarie

This paper demonstrates the use of portable DNA sequencing to identify plant viruses in sub-Saharan Africa, enabling timely crop disease management.

bioRxiv · May 31, 2018Plant Biology

Cassava brown streak virus has a rapidly evolving genome: implications for virus speciation, variability, diagnosis and host resistance

T. Alicai, J. Ndunguru, P. Sseruwagi, F. Tairo, G. Okao-Okuja, R. Nanvubya, L. Kiiza, L. Kubatko, M. A. Kehoe, L. M. Boykin

The paper compares the evolutionary rates of Cassava brown streak virus (CBSV) and Ugandan cassava brown streak virus (UCBSV) using whole genome sequences, finding CBSV evolves faster and has more nonsynonymous substitutions.

bioRxiv · May 16, 2016Evolutionary Biology