Author

T. D. Verschuuren

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

R. J. L. Willems· 2 shared A. C. Schurch· 1 shared A. C. Schürch· 1 shared D. van Hout· 1 shared J. A. J. W. Kluytmans· 1 shared J. C. Braat· 1 shared J. Corander· 1 shared J. Top· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersMicrobiology

R. J. L. Willems

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2 papers

Recent·Most cited

Extended-spectrum beta-lactamase (ESBL)-producing and non-ESBL-producing Escherichia coli isolates causing bacteremia in the Netherlands (2014 - 2016) differ in clonal distribution, antimicrobial resistance gene and virulence gene content

D. van Hout, T. D. Verschuuren, P. C. J. Bruijning-Verhagen, T. Bosch, A. C. Schürch, R. J. L. Willems, M. J. M. Bonten, J. A. J. W. Kluytmans

This study compares clonal distribution, antimicrobial resistance genes, and virulence gene content between ESBL-producing and non-ESBL-producing E. coli isolates causing bacteremia in Dutch hospitals.

bioRxiv · Oct 21, 2019Microbiology

mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

S. Arredondo-Alonso, M. R. C. Rogers, J. C. Braat, T. D. Verschuuren, J. Top, J. Corander, R. J. L. Willems, A. C. Schurch

The paper introduces mlplasmids, an SVM-based tool to classify short-read WGS contigs as plasmid- or chromosome-derived in bacterial species, achieving high accuracy across three species.

bioRxiv · May 23, 2018Microbiology