Author

T. M. Vogel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Research Focus:ecology & biodiversity· 2 Approach:statistical model· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1

Frequent Co-Authors

C. Larose· 2 shared A. Prieme· 1 shared B. M. Bergk Pinto· 1 shared C. S. Jacobsen· 1 shared D. T. Ramos· 1 shared H. X. Corseuil· 1 shared L. Maccario· 1 shared M. D. Schostag· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersMicrobiology

C. Larose

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

EggVio: a user friendly and versatile pipeline for assembly and functional annotation of shallow depth sequenced samples

B. M. Bergk Pinto, T. M. Vogel, C. Larose

EggVio improves metagenomic annotation quality for low-depth sequencing by using co-assembly and noise-aware e-value thresholds, achieving a 5% false discovery rate.

bioRxiv · Apr 23, 2022 · PreprintMicrobiology

Back to the Wild: Polluted Site Remediation and Biosphere Resilience

D. T. Ramos, H. X. Corseuil, T. M. Vogel

This study examines how microbial communities in polluted and remediated sites recover, showing that clean-up intensity affects the rate of return to original microbial composition.

bioRxiv · Apr 22, 2021 · PreprintBioengineering

Transcriptomic responses to warming and cooling of an Arctic tundra soil microbiome

M. D. Schostag, M. Z. Anwar, C. S. Jacobsen, C. Larose, T. M. Vogel, L. Maccario, S. Jacquiod, S. Faucherre, A. Prieme

This study examines how Arctic tundra soil microbiomes respond to warming and cooling, finding delayed transcriptional changes and increased CO2 production after thaw.

bioRxiv · Apr 4, 2019 · PreprintMicrobiology