T. Tarenzi

In search of a dynamical vocabulary: a pipeline to construct a basis of shared traits in large-scale motions of proteins

The paper introduces a pipeline to quantify large-scale protein dynamics using native structures, showing it can generalize to homologous proteins not in the initial dataset.

Membrane binding of pore-forming γ-hemolysin components studied at different lipid compositions

This paper uses molecular dynamics simulations to study how lipid composition affects the membrane binding of γ-hemolysin components LukF and Hlg2, providing insights into their interaction mechanisms.

How Communication Pathways Bridge Local and Global Conformations in an IgG4 Antibody: a Molecular Dynamics Study

This paper uses molecular dynamics simulations to show that the conformation of pembrolizumab correlates with its CDR, mediated by the hinge region, suggesting a communication network within antibodies.