Author

Taoufik Labib

Conservatoire National des Arts et Métiers

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:GWAS / association mapping· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Jean‐François ZaguryiD· 3 shared Jean‐Louis Spadoni· 3 shared Myriam RahmouniiD· 3 shared Sigrid Le ClerciD· 3 shared Maxime Tison· 2 shared Raíssa Medina SantosiD· 2 shared Adrien MaillotiD· 1 shared Alice Dobiecki· 1 shared

Activity by Year

2025-2025 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersGenomics

Jean‐François ZaguryORCID

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Author profile →

3 papers

Recent·Most cited

HaploExplore, first software specifically designed for the detection of minor allele (MiA-) Haploblocks

Matilde Manetti, Samuel Hiet, Myriam Rahmouni, Jean‐Louis Spadoni, Alice Dobiecki, Marco Lamanda, Maxime Tison, Taoufik Labib, Cristina Giuliani, Sigrid Le Clerc, Jean‐François Zagury

HaploExplore detects MiA-haploblocks, offering a novel approach for studying genetic associations and complex traits by focusing on minor allele haploblocks.

bioRxiv · Apr 23, 2025 · PreprintGenomics

Transcriptomic analysis of chronic chikungunya in the Reunionese CHIKGene cohort uncovers a shift in gene expression more than 10 years after infection

Patrick Gérardin, Raíssa Medina Santos, Sigrid Le Clerc, Léa Bruneau, Adrien Maillot, Taoufik Labib, Myriam Rahmouni, Jean‐Louis Spadoni, Jean-Philippe Meyniel, Clémence Cornet, Cécile Lefebvre, Nora El Jahrani, Jakub Savara, Mano Joseph Mathew, Christine Fontaine, , Jean‐François Zagury

The paper analyzes gene expression in chronic chikungunya patients and controls to identify differentially expressed genes and pathways associated with long-term effects of infection.

Travel Medicine and Infectious Disease · Feb 23, 2025Peer-reviewedBioinformatics

Deep analysis of the Major Histocompatibility Complex associations using covariate analysis and haploblocks unravels new mechanisms for the molecular etiology of Elite Control in AIDS

Myriam Rahmouni, Sigrid Le Clerc, Jean‐Louis Spadoni, Taoufik Labib, Maxime Tison, Raíssa Medina Santos, Armand Bensussan, Ryad Tamouza, Jean‐François Deleuze, Jean‐François Zagury

The paper reanalyzes genomic data from HIV-1 Elite Controllers to identify MHC-associated SNPs and HLA alleles, revealing haploblock effects and novel mechanisms for EC.

BMC Immunology · Jan 6, 2025Peer-reviewedImmunology