Author

Thang Tran

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Hy Vuong· 2 shared Son PhamiD· 2 shared Thao Truong· 2 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersBioinformatics

Hy Vuong

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2 papers

Recent·Most cited

Hera-T: an efficient and accurate approach for quantifying gene abundances from 10X-Chromium data with high rates of non-exonic reads.

Thang Tran, Thao Truong, Hy Vuong, Son Pham

Hera-T improves gene abundance quantification in 10X-Chromium data by reducing runtime and memory use while maintaining accuracy compared to Cell Ranger.

bioRxiv · Jan 26, 2019 · PreprintBioinformatics

A revisit of RSEM generative model and its EM algorithm for quantifying transcript abundances.

Hy Vuong, Thao Truong, Thang Tran, Son Pham

This paper revises the RSEM EM algorithm to improve quantification speed while maintaining accuracy, introducing optimizations and parameter convergence strategies.

bioRxiv · Dec 21, 2018 · PreprintBioinformatics