Author

Thomas Jacob

University of PittsburghPrimary ORCID profile (0000-0002-1428-2980 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Thomas JacobiD1 paper · Christian Medical College, Vellore

Biology Disciplines

Click to filter author papers

Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Aatur Dilip SinghiiD· 1 shared Elaine ByrnesiD· 1 shared Rajdeep Pawar· 1 shared Rebecca Raphael· 1 shared Shikhar UttamiD· 1 shared Simon C. WatkinsiD· 1 shared Thing Rinda SoongiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperSystems Biology

Aatur Dilip SinghiORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

SpaReg: sparsity-based 3D reconstruction of tissue microenvironments at native resolution across morphological and spatial molecular modalities

Rajdeep Pawar, Thomas Jacob, Rebecca Raphael, Elaine Byrnes, Simon C. Watkins, Thing Rinda Soong, Aatur Dilip Singhi, Shikhar Uttam

SpaReg reconstructs 3D tissue microenvironments from histology, spatial proteomics, and spatial transcriptomics data, preserving morphology and enabling accurate classification and disease modeling.

bioRxiv · Sep 29, 2026 · PreprintSystems Biology